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Systems Biology Ontology
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#	Item
31	BIOINFORMATICS Vol. 19 no, pages 524–531 DOI: bioinformatics/btg015 The systems biology markup language (SBML): a Add to Reading List Source URL: bip.cnrs-mrs.fr Language: English - Date: 2009-10-20 06:55:39 Science Biology Acronyms SBML Systems Biology Ontology COPASI Computing Systems biology Markup languages
32	The BioMANTA Ontology: Integration of ProteinProtein Interaction Data Andrew Newman1, Jane Hunter1, Yuan-Fang Li1, Chris Bouton2, and Melissa Davis3 1 3 Add to Reading List Source URL: www.itee.uq.edu.au Language: English - Date: 2015-03-13 09:36:20 Biological databases Semantic Web Systems biology Ontology BioPAX OBO Foundry UniProt Interactome STRING Science Bioinformatics Biology
33	Methodology for the inference of gene function from phenotype data Add to Reading List Source URL: www.biomedcentral.com Language: English Biological databases Polymorphism Systems biology Ontology Gene Ontology Annotation Phenotype Cytoscape Genotype Science Bioinformatics Biology
34	What BioPAX communicates and how to extend OWL to help it Alan Ruttenberg1 , Jonathan Rees2 and Jeremy Zucker3 1 3 Add to Reading List Source URL: ftp.informatik.rwth-aachen.de Language: English - Date: 2006-11-11 06:05:16 Information Systems biology Bioinformatics Genetics Molecular biology BioPAX Ontology Entity-relationship model Web Ontology Language Semantic Web Biology Science
35	Identifiers.org and its registry Camille Laibe BioMedBridges: resource integration workshop Add to Reading List Source URL: www.biomedbridges.eu Language: English - Date: 2014-10-01 05:17:47 Bioinformatics Systems biology Science and technology in Europe Ontology Minimum information required in the annotation of models Resource Gene Ontology European Molecular Biology Laboratory Uniform resource identifier Science Biology Biological databases
36	The Systems Biology Simulation Core Library: A numerical method for the quantitative simulation of biochemical reaction networks Alexander Dörr Add to Reading List Source URL: www.opentox.org Language: English - Date: 2014-02-05 06:54:46 SBML BioModels Database Stoichiometry COPASI Systems Biology Ontology Systems biology Biology Science
37	BIOINFORMATICS APPLICATIONS NOTE Vol. 25 no[removed], pages 838–840 doi:[removed]bioinformatics/btp049 Data and text mining Add to Reading List Source URL: www.ncbi.nlm.nih.gov Language: English Biological databases Systems biology Mathematical and theoretical biology Biomedical text mining Data mining BioCreative DAVID Cytoscape Gene Ontology Science Biology Bioinformatics
38	Systems Biology Markup Language (SBML) Level 1: Structures and Facilities for Basic Model Definitions Michael Hucka, Andrew Finney, Herbert Sauro, Hamid Bolouri {mhucka,afinney,hsauro,hbolouri}@cds.caltech.edu Systems Bi Add to Reading List Source URL: iweb.dl.sourceforge.net Language: English - Date: 2003-09-26 21:42:31 Biology Science Acronyms SBML COPASI XML Namespace Uniform resource identifier Systems Biology Ontology Systems biology Computing Markup languages
39	Rule-based Protein Term Identification with Help from Automatic Species Tagging Xinglong Wang School of Informatics University of Edinburgh 2 Buccleuch Place Add to Reading List Source URL: www.ltg.ed.ac.uk Language: English - Date: 2007-05-10 14:22:15 Knowledge Biological databases Systems biology Proteomics Ontology Identifier Biomedical text mining Natural language processing Gene Ontology Science Biology Bioinformatics
40	The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core Michael Hucka (Chair) Frank T. Bergmann Stefan Hoops Add to Reading List Source URL: iweb.dl.sourceforge.net Language: English - Date: 2011-06-01 23:02:17 Web standards Acronyms SBML Technical communication ISO standards Systems Biology Ontology XML Unified Modeling Language HTML Computing Markup languages Systems biology

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